General
Preferred name
TH5427
Synonyms
TH 5427 hydrochloride ()
28 ()
P&D ID
PD117745
CAS
2253744-56-6
Tags
available
probe
Probe info
Probe type
experimental probe
Probe targets
Structure
Probe scores
P&D probe-likeness score
[[ v.score ]]%
Structure formats
[[ format ]]
[[ compound[format === 'MOL' ? 'molblock' : format.toLowerCase()] ]]
Description
(extracted from source data)
COMMENT TH5427 is potent and selective chemical probe for NUDT5, a NUDIX hydrolase enzyme that plays important roles in the metabolism of adenosine-5’-diphisphoribose (ADPR) metabolism and regulation of hormone signaling. NUDT5 has been implicated in breast cancer, and TH5427 should provide a valuable tool for the continued exploration of the role of this target in breast cancer and other diseases models. TH5427 is at least 690-fold selective for NUDT5 over other NUDIX hydrolases in vitro, with only limited demonstrated interactions outside of the NUDIX hydrolyase family. I recommend the use of this probe in cells at concentrations up to 1.5 µM, with demonstrated effectiveness in HL-60 and T47D cells. TH5427 does show a large cellular potency offset comparing potency in vitro (malachite green assay, 29 nm) vs in cellular target engagement assays (CETSA and DARTS, 0.75-2.1 µM), though this potency offset has not been specifically explained (i.e. cellular availability vs metabolite competition or other factors). Jul 11 2020 - 3:00pm; TH5427 showed 690-fold selectivity for NUDT5 over MTH1 in direct assay of ADP-ribose hydrolysis in vitro. Jul 26 2020 - 10:06am
DESCRIPTION TH5427 is a promising, targeted inhibitor that can be used to further study NUDT5 activity and ADP-ribose metabolism. TH5427, blocks progestin-dependent, PAR-derived nuclear ATP synthesis and subsequent chromatin remodeling, gene regulation and proliferation in breast cancer cells. NUDT5 is recently identified as a rheostat of hormone-dependent gene regulation and proliferation in breast cancer cells[1].
PRICE 319
DESCRIPTION TH5427 is a lead NUDT5 inhibitor(MG assay IC50?=?29?nM).
MOA Inhibitor (Chemical Probes.org)
DESCRIPTION Potent and selective ATP-competitive CDK9 inhibitor (Tocris Bioactive Compound Library)
DESCRIPTION TH5427 is a lead NUDT5 inhibitor(MG assay IC50 = 29 nM). (TargetMol Bioactive Compound Library)
Compound Sets
6
Chemical Probes.org
CZ-OPENSCREEN Bioactive Library
High-quality chemical probes
MedChem Express Bioactive Compound Library
TargetMol Bioactive Compound Library
Tocris Bioactive Compound Library
External IDs
11
Properties
(calculated by RDKit )
Molecular Weight
490.1
Hydrogen Bond Acceptors
11
Hydrogen Bond Donors
1
Rotatable Bonds
4
Ring Count
5
Aromatic Ring Count
4
cLogP
1.25
TPSA
116.01
Fraction CSP3
0.35
Chiral centers
0.0
Largest ring
6.0
QED
0.45
Structural alerts
0
No structural alerts detected
Custom attributes
(extracted from source data)
Target
NUDT5
Primary Target
Other Hydrolases
MOA
Inhibitor
Target class
Epigenetics
Epigenetic
Pathway
Metabolism
Target subclass
Nudix Hydrolase
Source data